Index

A

about() (ffparam.FFPMainWindow.MainWindow method) accepteddata (ffparam.script_core.MMWriter.CharmmWriter attribute) activate() (in module ffparam.FFPMainWindow) addcolumn() (ffparam.FFPMainWindow.MainWindow method) addrow() (ffparam.FFPMainWindow.MainWindow method)

angle() (ffparam.FFPMainWindow.OpenGLCanvas method) (in module ffparam.script_core.orphan) anisotropy() (ffparam.script_core.rtftopsf.rtftopsf method) anycoortocrd() (ffparam.Windowsaction.Winact method) appendlsfitpar() (ffparam.Windowsaction.Winact method) atomicnr() (ffparam.script_core.ffp_rdkit.RDMol static method)

C

canonical_format() (in module ffparam.script_core.toppario) cartzmattocart() (ffparam.script_core.moleculereader.Molecule static method) changenr() (in module ffparam.script_core.orphan) charmmaddibot() (in module ffparam.script_core.mmfileio) charmmadditop() (in module ffparam.script_core.mmfileio) charmmdrudbot() (in module ffparam.script_core.mmfileio) charmmdrudtop() (in module ffparam.script_core.mmfileio) Charmmgeom() (ffparam.script_core.CharmmInputWriter.CharmmInputWriter method) CharmmInputWriter (class in ffparam.script_core.CharmmInputWriter) Charmmquick() (ffparam.script_core.CharmmInputWriter.CharmmInputWriter method) Charmmwatint() (ffparam.script_core.CharmmInputWriter.CharmmInputWriter method) CharmmWriter (class in ffparam.script_core.MMWriter) checkBox_3_behav() (ffparam.FFPMainWindow.MainWindow method) checkBox_4() (ffparam.FFPMainWindow.MainWindow method) checkBox_5() (ffparam.FFPMainWindow.MainWindow method) checkBox_9() (ffparam.FFPMainWindow.MainWindow method) chng() (ffparam.script_core.mcsa.mcsa method) clearGL() (ffparam.FFPMainWindow.OpenGLCanvas method) clearplot() (ffparam.FFPMainWindow.MainWindow method) clearstatus() (ffparam.FFPMainWindow.MainWindow method)

close_application() (ffparam.FFPMainWindow.MainWindow method) comboBox_15_behav() (ffparam.FFPMainWindow.MainWindow method) connectitto12() (ffparam.FFPMainWindow.MainWindow method) connectitto13() (ffparam.FFPMainWindow.MainWindow method) connectitto23() (ffparam.FFPMainWindow.MainWindow method) connectremote() (ffparam.FFPMainWindow.MainWindow method) coordinates_fromrdmol() (ffparam.script_core.ffp_rdkit.RDMol method) CoordinateWriter (class in ffparam.script_core.CoordinateWriter) crdformat() (in module ffparam.script_core.CoordinateWriter) crdline() (in module ffparam.script_core.CoordinateWriter) createcrd_9() (ffparam.FFPMainWindow.MainWindow method) createda() (in module ffparam.script_core.qmfileio) creatediheinp() (ffparam.script_core.GaussInputWriter.GaussInputWriter method) creategeominp() (ffparam.script_core.GaussInputWriter.GaussInputWriter method) createmap() (in module ffparam.script_core.toppario) CreateMM() (ffparam.Windowsaction.Winact method) CreatePDB() (ffparam.Windowsaction.Winact method) CreateQM() (ffparam.Windowsaction.Winact method) createscript() (ffparam.FFPMainWindow.MainWindow method) createwatbsseinp() (ffparam.script_core.GaussInputWriter.GaussInputWriter method) createwatinp() (ffparam.script_core.GaussInputWriter.GaussInputWriter method)

D

daltozmat_w() (in module ffparam.script_core.qmfileio) datatypes (ffparam.script_core.Psi4Parser.Psi4Parser attribute) dcharge() (ffparam.script_core.rtftopsf.rtftopsf method) dectop() (ffparam.script_core.GaussInputWriter.GaussInputWriter method) delYSlot() (ffparam.FFPMainWindow.MainWindow method) dihedral() (ffparam.FFPMainWindow.OpenGLCanvas method) dipoldiffcalc() (in module ffparam.diffcalc)

dipole() (ffparam.script_core.openmm_calc.OmmCalc method) dir_browse_67() (ffparam.FFPMainWindow.MainWindow method) display_file() (ffparam.FFPMainWindow.MainWindow method) dispmsg() (ffparam.FFPMainWindow.MainWindow method) distance() (ffparam.FFPMainWindow.OpenGLCanvas method) documentation() (ffparam.FFPMainWindow.MainWindow method) dotproduct() (in module ffparam.script_core.orphan) drawBallAndStick() (ffparam.FFPMainWindow.OpenGLCanvas method)

E

editrestart() (ffparam.FFPMainWindow.MainWindow method) eleinfo() (in module ffparam.script_core.EleInfo) Element (class in ffparam.script_core.moleculereader) enable_buttons() (ffparam.FFPMainWindow.MainWindow method) enable_exqmbutn() (ffparam.FFPMainWindow.MainWindow method) enablebtn_48() (ffparam.FFPMainWindow.MainWindow method) equivalentgrp() (ffparam.script_core.mcsa.mcsa method) error_redistribute() (ffparam.script_core.mcsa.mcsa method) exec_analysis() (ffparam.FFPMainWindow.MainWindow method) exec_lsfit() (ffparam.FFPMainWindow.MainWindow method) exec_plot() (ffparam.FFPMainWindow.MainWindow method) execute_13() (ffparam.FFPMainWindow.MainWindow method)

execute_20() (ffparam.FFPMainWindow.MainWindow method) execute_3() (ffparam.FFPMainWindow.MainWindow method) execute_51() (ffparam.FFPMainWindow.MainWindow method) execute_53() (ffparam.FFPMainWindow.MainWindow method) execute_56() (ffparam.FFPMainWindow.MainWindow method) execute_7() (ffparam.FFPMainWindow.MainWindow method) executemcsa_65() (ffparam.FFPMainWindow.MainWindow method) executeMM_26() (ffparam.FFPMainWindow.MainWindow method) executeMM_26_charmm() (ffparam.FFPMainWindow.MainWindow method) executeMM_26_openmm() (ffparam.FFPMainWindow.MainWindow method) Extractdihe() (ffparam.script_core.GaussParser.GaussParser method) Extractmolprop() (ffparam.script_core.GaussParser.GaussParser method)

F

fcog() (ffparam.script_core.openmm_calc.OmmCalc method) fcom() (ffparam.script_core.openmm_calc.OmmCalc method) fctnchrm() (ffparam.script_core.mcsa.mcsa method) fctnomm() (ffparam.script_core.mcsa.mcsa method) ffparam module ffparam.diffcalc module ffparam.ffparamgui module ffparam.FFPMainWindow module ffparam.plotscan module ffparam.remotewindow module ffparam.script_core module ffparam.script_core.CharmmInputWriter module ffparam.script_core.CoordinateWriter module ffparam.script_core.EleInfo module ffparam.script_core.ffp_cgenff module ffparam.script_core.ffp_rdkit module ffparam.script_core.ffpmol module ffparam.script_core.GaussInputWriter module ffparam.script_core.GaussParser module ffparam.script_core.mcsa module ffparam.script_core.mmfileio module ffparam.script_core.MMWriter module ffparam.script_core.moleculereader module ffparam.script_core.openmm_calc module ffparam.script_core.orphan module ffparam.script_core.Psi4InputWriter module ffparam.script_core.Psi4Parser module

ffparam.script_core.qmfileio module ffparam.script_core.QMResultWriter module ffparam.script_core.rtftopsf module ffparam.script_core.toppario module ffparam.search module ffparam.Windowsaction module FFPMol (class in ffparam.script_core.ffpmol) file_browse() (ffparam.FFPMainWindow.MainWindow method) file_browse_11() (ffparam.FFPMainWindow.MainWindow method) file_browse_19() (ffparam.FFPMainWindow.MainWindow method) file_browse_22() (ffparam.FFPMainWindow.MainWindow method) file_browse_23() (ffparam.FFPMainWindow.MainWindow method) file_browse_24() (ffparam.FFPMainWindow.MainWindow method) file_browse_25() (ffparam.FFPMainWindow.MainWindow method) file_browse_27() (ffparam.FFPMainWindow.MainWindow method) file_browse_28() (ffparam.FFPMainWindow.MainWindow method) file_browse_29() (ffparam.FFPMainWindow.MainWindow method) file_browse_30() (ffparam.FFPMainWindow.MainWindow method) file_browse_38() (ffparam.FFPMainWindow.MainWindow method) file_browse_40() (ffparam.FFPMainWindow.MainWindow method) file_browse_44() (ffparam.FFPMainWindow.MainWindow method) file_browse_45() (ffparam.FFPMainWindow.MainWindow method) file_browse_46() (ffparam.FFPMainWindow.MainWindow method) file_browse_47() (ffparam.FFPMainWindow.MainWindow method) file_browse_50() (ffparam.FFPMainWindow.MainWindow method) file_browse_52() (ffparam.FFPMainWindow.MainWindow method) file_browse_54() (ffparam.FFPMainWindow.MainWindow method) file_browse_55() (ffparam.FFPMainWindow.MainWindow method) file_browse_64() (ffparam.FFPMainWindow.MainWindow method) file_browse_68() (ffparam.FFPMainWindow.MainWindow method) file_browse_69() (ffparam.FFPMainWindow.MainWindow method) file_browse_70() (ffparam.FFPMainWindow.MainWindow method) file_browse_71() (ffparam.FFPMainWindow.MainWindow method) file_edit() (ffparam.FFPMainWindow.MainWindow method) file_open() (ffparam.FFPMainWindow.MainWindow method) file_save() (ffparam.FFPMainWindow.MainWindow method) file_saveas() (ffparam.FFPMainWindow.MainWindow method) file_search() (ffparam.FFPMainWindow.MainWindow method) findangles() (ffparam.script_core.rtftopsf.rtftopsf method) findbonds() (ffparam.script_core.rtftopsf.rtftopsf method) finddihedrals() (ffparam.script_core.rtftopsf.rtftopsf method) frange() (in module ffparam.script_core.orphan)

G

Gaudihcmnt() (ffparam.script_core.GaussInputWriter.GaussInputWriter method) Gaugeocmnt() (ffparam.script_core.GaussInputWriter.GaussInputWriter method) GaussInputWriter (class in ffparam.script_core.GaussInputWriter) GaussParser (class in ffparam.script_core.GaussParser) Gautop() (ffparam.script_core.GaussInputWriter.GaussInputWriter method) Gauwatbot() (ffparam.script_core.GaussInputWriter.GaussInputWriter method) Gauwatcmnt() (ffparam.script_core.GaussInputWriter.GaussInputWriter method)

Gauwatscanbot() (ffparam.script_core.GaussInputWriter.GaussInputWriter method) genbonds() (ffparam.script_core.moleculereader.Molecule method) generate_init() (ffparam.script_core.ffpmol.FFPMol method) generatemolfromstr() (ffparam.script_core.ffp_rdkit.RDMol method) GenFF (class in ffparam.script_core.ffp_cgenff) getenergy() (ffparam.script_core.openmm_calc.OmmCalc method) getoutput() (ffparam.FFPMainWindow.MainWindow method) getstatus() (ffparam.FFPMainWindow.MainWindow method)

H

haccmm() (in module ffparam.script_core.mmfileio) haccqm() (in module ffparam.script_core.qmfileio)

hartreetokcal() (ffparam.script_core.QMResultWriter.QMResultWriter static method) hdonormm() (in module ffparam.script_core.mmfileio) hdonorqm() (in module ffparam.script_core.qmfileio)

I

ic_disp() (ffparam.FFPMainWindow.OpenGLCanvas method) importplot() (ffparam.FFPMainWindow.MainWindow method) initdrlp() (ffparam.script_core.openmm_calc.OmmCalc method)

initializeGL() (ffparam.FFPMainWindow.OpenGLCanvas method) inte_pre() (ffparam.script_core.openmm_calc.OmmCalc method) intediffcalc() (in module ffparam.diffcalc) isotropy() (ffparam.script_core.rtftopsf.rtftopsf method)

K

kill_21() (ffparam.FFPMainWindow.MainWindow method)

kill_72() (ffparam.FFPMainWindow.MainWindow method)

L

length() (in module ffparam.script_core.orphan) load_48() (ffparam.FFPMainWindow.MainWindow method) load_cgenff() (ffparam.FFPMainWindow.MainWindow method) load_charmm() (ffparam.FFPMainWindow.MainWindow method) load_gauss() (ffparam.FFPMainWindow.MainWindow method) load_lsfit() (ffparam.FFPMainWindow.MainWindow method) load_restart() (ffparam.FFPMainWindow.MainWindow method)

LoadFromFile (class in ffparam.script_core.mcsa) (class in ffparam.script_core.openmm_calc) lsfit_add_dihe_14() (ffparam.FFPMainWindow.MainWindow method) lsfit_clearall_16() (ffparam.FFPMainWindow.MainWindow method) lsfit_clearlast_15() (ffparam.FFPMainWindow.MainWindow method) lsfitoutput() (ffparam.FFPMainWindow.MainWindow method) lsfitparstr() (ffparam.Windowsaction.Winact method)

M

main() (in module ffparam.FFPMainWindow) (in module ffparam.script_core.mcsa) (in module ffparam.script_core.rtftopsf) MainWindow (class in ffparam.FFPMainWindow) mcsa (class in ffparam.script_core.mcsa) mcsa_dipo() (ffparam.script_core.openmm_calc.OmmCalc method) mcsa_pre() (ffparam.script_core.openmm_calc.OmmCalc method) mcsamain() (ffparam.script_core.mcsa.mcsa method) mergepos() (ffparam.script_core.moleculereader.Molecule method) minimization() (ffparam.script_core.openmm_calc.OmmCalc method) minimize_onlydrude() (ffparam.script_core.openmm_calc.OmmCalc method) mmc_diheautoload() (ffparam.FFPMainWindow.MainWindow method) mmfile_display() (ffparam.FFPMainWindow.MainWindow method) module ffparam ffparam.diffcalc ffparam.ffparamgui ffparam.FFPMainWindow ffparam.plotscan ffparam.remotewindow ffparam.script_core ffparam.script_core.CharmmInputWriter ffparam.script_core.CoordinateWriter ffparam.script_core.EleInfo ffparam.script_core.ffp_cgenff ffparam.script_core.ffp_rdkit ffparam.script_core.ffpmol ffparam.script_core.GaussInputWriter ffparam.script_core.GaussParser ffparam.script_core.mcsa ffparam.script_core.mmfileio ffparam.script_core.MMWriter ffparam.script_core.moleculereader ffparam.script_core.openmm_calc ffparam.script_core.orphan ffparam.script_core.Psi4InputWriter ffparam.script_core.Psi4Parser ffparam.script_core.qmfileio ffparam.script_core.QMResultWriter ffparam.script_core.rtftopsf ffparam.script_core.toppario ffparam.search ffparam.Windowsaction

mol_display_action() (ffparam.FFPMainWindow.OpenGLCanvas method) Molecule (class in ffparam.script_core.moleculereader) molpol() (ffparam.script_core.openmm_calc.OmmCalc method) MolTransform (class in ffparam.script_core.ffp_rdkit) mouseDoubleClickEvent() (ffparam.FFPMainWindow.OpenGLCanvas method) mouseMoveEvent() (ffparam.FFPMainWindow.OpenGLCanvas method) mousePressEvent() (ffparam.FFPMainWindow.OpenGLCanvas method) msgpop() (ffparam.FFPMainWindow.Popper method)

N

ndonormm() (in module ffparam.script_core.mmfileio)

ndonorqm() (in module ffparam.script_core.qmfileio)

O

o3accmm() (in module ffparam.script_core.mmfileio) o3accqm() (in module ffparam.script_core.qmfileio) omm_coor (class in ffparam.script_core.openmm_calc) omm_writecrd() (ffparam.script_core.openmm_calc.OmmCalc method) OmmCalc (class in ffparam.script_core.openmm_calc)

ommtypepos() (ffparam.script_core.openmm_calc.OmmCalc method) oneaccmm() (in module ffparam.script_core.mmfileio) oneaccqm() (in module ffparam.script_core.qmfileio) openAction() (ffparam.FFPMainWindow.MainWindow method) OpenGLCanvas (class in ffparam.FFPMainWindow) organize_2() (ffparam.FFPMainWindow.MainWindow method)

P

paintGL() (ffparam.FFPMainWindow.OpenGLCanvas method) parse_bondedscan() (ffparam.script_core.Psi4Parser.Psi4Parser method) parse_dipole() (ffparam.script_core.Psi4Parser.Psi4Parser method) parse_frequency() (ffparam.script_core.Psi4Parser.Psi4Parser method) parse_geom() (ffparam.script_core.Psi4Parser.Psi4Parser method) parse_ic() (ffparam.script_core.Psi4Parser.Psi4Parser method) parse_interaction() (ffparam.script_core.Psi4Parser.Psi4Parser method) parse_loggeom() (ffparam.script_core.Psi4Parser.Psi4Parser method) parsedata() (ffparam.script_core.Psi4InputWriter.Psi4Writer method) ParseQM() (ffparam.Windowsaction.Winact method) parseqmtop() (ffparam.script_core.Psi4InputWriter.Psi4Writer method) parser() (ffparam.script_core.Psi4Parser.Psi4Parser method) plotgraph() (ffparam.plotscan.Plotter method)

Plotter (class in ffparam.plotscan) polau3toang3() (ffparam.script_core.QMResultWriter.QMResultWriter static method) Popper (class in ffparam.FFPMainWindow) Psi4fixedloop (ffparam.script_core.Psi4InputWriter.Psi4Writer attribute) Psi4footer (ffparam.script_core.Psi4InputWriter.Psi4Writer attribute) Psi4frozenloop (ffparam.script_core.Psi4InputWriter.Psi4Writer attribute) Psi4header (ffparam.script_core.Psi4InputWriter.Psi4Writer attribute) Psi4interactionloop (ffparam.script_core.Psi4InputWriter.Psi4Writer attribute) Psi4moltmpl (ffparam.script_core.Psi4InputWriter.Psi4Writer attribute) Psi4Parser (class in ffparam.script_core.Psi4Parser) Psi4polarloop (ffparam.script_core.Psi4InputWriter.Psi4Writer attribute) Psi4smoltmpl (ffparam.script_core.Psi4InputWriter.Psi4Writer attribute) Psi4Writer (class in ffparam.script_core.Psi4InputWriter) Psi4xyz() (ffparam.script_core.Psi4InputWriter.Psi4Writer method)

Q

qmdipoleresult() (ffparam.script_core.QMResultWriter.QMResultWriter method) qminteraction() (ffparam.script_core.QMResultWriter.QMResultWriter method) qmquickresult() (ffparam.script_core.QMResultWriter.QMResultWriter method)

QMResultWriter (class in ffparam.script_core.QMResultWriter) qmscaleresult() (ffparam.script_core.QMResultWriter.QMResultWriter static method) qualityButton_behav() (ffparam.FFPMainWindow.MainWindow method) quicdiffcalc() (in module ffparam.diffcalc)

R

radioButton_2_behav() (ffparam.FFPMainWindow.MainWindow method) radioButton_3_behav() (ffparam.FFPMainWindow.MainWindow method) radioButton_4_behav() (ffparam.FFPMainWindow.MainWindow method) radioButton_5_behav() (ffparam.FFPMainWindow.MainWindow method) radioButton_6_behav() (ffparam.FFPMainWindow.MainWindow method) radioButton_7_behav() (ffparam.FFPMainWindow.MainWindow method) radioButton_8_behav() (ffparam.FFPMainWindow.MainWindow method) radioButton_behav() (ffparam.FFPMainWindow.MainWindow method) ranking() (in module ffparam.script_core.toppario) rchrgstr() (ffparam.script_core.mcsa.mcsa method) rdipol() (ffparam.script_core.mcsa.mcsa method) RDMol (class in ffparam.script_core.ffp_rdkit) rdmoltomol2() (ffparam.script_core.ffp_rdkit.RDMol method) read_coor() (ffparam.script_core.openmm_calc.OmmCalc method) read_paramfiles() (ffparam.script_core.openmm_calc.OmmCalc method) read_params() (ffparam.script_core.openmm_calc.OmmCalc method) readcoor() (ffparam.script_core.ffpmol.FFPMol method) (ffparam.script_core.moleculereader.Molecule method) readdipofile() (in module ffparam.diffcalc) readintefile() (in module ffparam.diffcalc) readparam() (in module ffparam.script_core.toppario) readpdb() (ffparam.script_core.moleculereader.Molecule static method) readplot() (ffparam.plotscan.Plotter method) readplotfile() (ffparam.plotscan.Plotter method) readpyxyz() (ffparam.script_core.moleculereader.Molecule static method)

readquicfile() (in module ffparam.diffcalc) readstr() (ffparam.script_core.ffpmol.FFPMol method) readtoppar() (ffparam.script_core.rtftopsf.rtftopsf method) remoteconnect() (ffparam.FFPMainWindow.MainWindow method) RemoteConnection (class in ffparam.remotewindow) resizeGL() (ffparam.FFPMainWindow.OpenGLCanvas method) restart() (ffparam.FFPMainWindow.MainWindow method) restoreorig() (ffparam.remotewindow.RemoteConnection method) restoreremote() (ffparam.remotewindow.RemoteConnection method) restraincharge() (ffparam.script_core.mcsa.mcsa method) retranslateUi() (ffparam.ffparamgui.Ui_MainWindow method) (ffparam.remotewindow.RemoteConnection method) (ffparam.search.search method) reverse_readline() (in module ffparam.script_core.orphan) rintene() (ffparam.script_core.mcsa.mcsa method) rmse() (ffparam.script_core.mcsa.mcsa method) rtftopsf (class in ffparam.script_core.rtftopsf) run() (ffparam.script_core.ffp_cgenff.GenFF method) (ffparam.script_core.Psi4InputWriter.Psi4Writer method) (ffparam.script_core.Psi4Parser.Psi4Parser method) run_intcoor() (ffparam.script_core.openmm_calc.OmmCalc method) run_inte_ene() (ffparam.script_core.openmm_calc.OmmCalc method) run_pes() (ffparam.script_core.openmm_calc.OmmCalc method) rundirect() (ffparam.FFPMainWindow.MainWindow method) runremote() (ffparam.FFPMainWindow.MainWindow method)

S

saveimage() (ffparam.FFPMainWindow.OpenGLCanvas method) saveremote() (ffparam.remotewindow.RemoteConnection method) scandatatype() (ffparam.script_core.Psi4InputWriter.Psi4Writer method) sdrude() (ffparam.script_core.openmm_calc.OmmCalc method) search (class in ffparam.search) seleprocess() (ffparam.script_core.mcsa.mcsa method) sepkeepdigit() (in module ffparam.script_core.orphan) sepkeepletter() (in module ffparam.script_core.orphan) set_position() (ffparam.script_core.openmm_calc.OmmCalc method) set_qmcommands() (ffparam.FFPMainWindow.MainWindow method) set_simulation() (ffparam.script_core.openmm_calc.OmmCalc method) setbounds() (ffparam.script_core.mcsa.mcsa method) setupUi() (ffparam.ffparamgui.Ui_MainWindow method) (ffparam.remotewindow.RemoteConnection method) (ffparam.search.search method)

setYSlot() (ffparam.FFPMainWindow.MainWindow method) shake() (ffparam.script_core.openmm_calc.OmmCalc method) staticMetaObject (ffparam.FFPMainWindow.MainWindow attribute) (ffparam.FFPMainWindow.OpenGLCanvas attribute) (ffparam.FFPMainWindow.Popper attribute) (ffparam.remotewindow.RemoteConnection attribute) (ffparam.search.search attribute) str2bool() (ffparam.script_core.openmm_calc.OmmCalc method) (in module ffparam.script_core.mcsa) suggestion() (ffparam.Windowsaction.Winact method) suggpush() (ffparam.FFPMainWindow.MainWindow method) summation() (ffparam.FFPMainWindow.MainWindow method) swm4_coor() (ffparam.script_core.openmm_calc.OmmCalc method)

T

tabletosele() (ffparam.FFPMainWindow.MainWindow method) tabletotext() (ffparam.FFPMainWindow.MainWindow method) texttopaste() (ffparam.remotewindow.RemoteConnection method) texttotable() (ffparam.FFPMainWindow.MainWindow method) thequality() (ffparam.FFPMainWindow.OpenGLCanvas method)

tip3_coor() (ffparam.script_core.openmm_calc.OmmCalc method) tracebackalph() (ffparam.script_core.mcsa.mcsa method) tracebackchrg() (ffparam.script_core.mcsa.mcsa method) tracebackthol() (ffparam.script_core.mcsa.mcsa method) translateModel() (ffparam.FFPMainWindow.OpenGLCanvas method) tutorial() (ffparam.FFPMainWindow.MainWindow method)

U

Ui_MainWindow (class in ffparam.ffparamgui) uncaught_exceptions() (in module ffparam.FFPMainWindow)

uni_hesparser() (ffparam.script_core.Psi4Parser.Psi4Parser method) updateGL() (ffparam.FFPMainWindow.OpenGLCanvas method) updateplot() (ffparam.FFPMainWindow.MainWindow method)

V

vis_close_42() (ffparam.FFPMainWindow.MainWindow method) vis_open_41() (ffparam.FFPMainWindow.MainWindow method)

vis_save_43() (ffparam.FFPMainWindow.MainWindow method) vis_type() (ffparam.FFPMainWindow.OpenGLCanvas method)

W

wchrgstr() (ffparam.script_core.mcsa.mcsa method) weighting() (ffparam.script_core.mcsa.mcsa method) wheelEvent() (ffparam.FFPMainWindow.OpenGLCanvas method) wiki_dihedral() (ffparam.Windowsaction.Winact method) Winact (class in ffparam.Windowsaction) writebondedscan() (ffparam.script_core.Psi4InputWriter.Psi4Writer method) writecrd() (ffparam.script_core.CoordinateWriter.CoordinateWriter method)

writefixedscan() (ffparam.script_core.Psi4InputWriter.Psi4Writer method) writeformat() (ffparam.script_core.rtftopsf.rtftopsf method) writegeom() (ffparam.script_core.Psi4InputWriter.Psi4Writer method) writeinteraction() (ffparam.script_core.Psi4InputWriter.Psi4Writer method) writemminputs() (ffparam.script_core.MMWriter.CharmmWriter method) writepsf() (ffparam.script_core.rtftopsf.rtftopsf method) writequick() (ffparam.script_core.MMWriter.CharmmWriter method) writexyz() (ffparam.script_core.CoordinateWriter.CoordinateWriter method)

Z

zerosugg() (ffparam.FFPMainWindow.MainWindow method)

zoomModel() (ffparam.FFPMainWindow.OpenGLCanvas method)